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Cis-eQTLs across different cancer types

In cis-eQTL analysis, we identified 5,606,570 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

 

e.g., "STAD"
e.g., "rs2351010"
e.g., "ERAP2"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs56326890 chr19:15120204 A/G TECR chr19:14627897-14676792:+ 0.53 5.06 5.59E-6 Box Plot
ACC rs56340521 chr7:64447455 C/T INTS4L1 chr7:64601603-64694600:+ 0.7 5.19 3.52E-6 Box Plot
ACC rs56364604 chr3:93705034 G/A STX19 chr3:93733213-93747454:- 0.75 5.93 2.51E-7 Box Plot
ACC rs56390603 chr7:72245898 C/T TYW1B chr7:72023729-72298777:- 1.24 8.3 4.23E-11 Box Plot
ACC rs56410881 chr17:62979783 A/C AMZ2P1 chr17:62962668-62971694:- 0.9 5.57 9.2E-7 Box Plot
ACC rs56412438 chr7:72187987 G/A TYW1B chr7:72023729-72298777:- 1.27 8.83 6.35E-12 Box Plot
ACC rs56412572 chr7:72239964 T/C TYW1B chr7:72023729-72298777:- 1.24 8.3 4.23E-11 Box Plot
ACC rs565883 chr1:245200068 A/G EFCAB2 chr1:245133007-245290466:+ 0.69 5.87 3.09E-7 Box Plot
ACC rs56803264 chr7:98211709 C/T TRRAP chr7:98475556-98610866:+ 1.13 5.39 1.74E-6 Box Plot
ACC rs56909980 chr7:72203162 C/T TYW1B chr7:72023729-72298777:- 1.28 9.02 3.23E-12 Box Plot
ACC rs57161853 chr7:72212660 A/G TYW1B chr7:72023729-72298777:- 1.27 9.01 3.36E-12 Box Plot
ACC rs57185946 chr1:213064645 TTGGGAGGCTGAGGCAGAAG LQK1 chr1:213029947-213031480:- 0.73 6.32 6.05E-8 Box Plot
ACC rs57338956 chr20:44439214 CTT/C WFDC3 chr20:44376583-44420571:- 0.95 6.51 2.98E-8 Box Plot
ACC rs5751770 chr22:24252842 A/G GSTT1 chr22:24376133-24384680:- 0.71 6.24 8.1E-8 Box Plot
ACC rs5751770 chr22:24252842 A/G LOC391322 chr22:24373117-24374043:+ 0.65 5.45 1.39E-6 Box Plot